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US-12624027-B2 - Salts and polymorphic forms of 6-chloro-7-(4-(4-chlorobenzyl)piperazin-1-yl)-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridine

US12624027B2US 12624027 B2US12624027 B2US 12624027B2US-12624027-B2

Abstract

The present invention relates to salts and polymorphic forms of Compound A (6-chloro-7-(4-(4-chlorobenzyl)piperazin-1-yl)-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridine), an inhibitor of Aurora kinase and FMS-like tyrosine kinase 3 (FLT3) activity. The present invention also relates to processes for the preparation of the salts and polymorphic forms of the compound, to pharmaceutical compositions comprising them, and to their use in the treatment of proliferative disorders, such as cancer, as well as other diseases or conditions in which Aurora kinase and/or FLT3 activity is implicated.

Inventors

  • Jonathan LOUGHREY
  • Natalie KELK
  • Michaela KREINER
  • Gavin HALBERT

Assignees

  • ELLIPSES PHARMA LTD
  • INSTITUTE OF CANCER RESEARCH: ROYAL CANCER HOSPITAL (THE)

Dates

Publication Date
20260512
Application Date
20210303
Priority Date
20200304

Claims (6)

  1. 1 . A crystalline Form 1 of Compound A fumarate: which is characterised by one or more of the following properties: a) an XRPD pattern with at least the following XRPD peaks (CuK °2θ) at approximately (±0.1): 12.9, 20.5, 21.2, 22.9, and 23.4; b) an XRPD pattern the same as shown in FIG. 1 ; and/or c) the following unit cell parameters at 298 K: System a b c Monoclinic P 9.7(1) Å 17.4(2) Å 32.5(1) Å alpha beta gamma A Monoclinic P 90 88.35 90 5483 Å 3 .
  2. 2 . A crystalline Form 2, Form 3, Form 4, Form 5 or Form 8 of Compound A fumarate: wherein Form 2 is characterised by one or more of the following properties: i) an XRPD pattern with at least the following XRPD peaks (CuK 2θ) at approximately (±0.1): 15.4, 15.8, 16.3, and 24.5; ii) an XRPD pattern the same as shown in FIG. 2 ; and/or iii) the following unit cell parameters at 298 K: System a b c alpha beta gamma Triclinic P 8.3(1) Å 14.1(2) Å 20.8(4) Å 86.72 90.24 95.95; wherein Form 3 is characterised by one or more of the following properties: iv) an XRPD pattern with at least the following XRPD peaks (CuK 2θ) at approximately (±0.1): 8.8, 17.4, 17.7, and 18.2; x) an XRPD pattern the same as shown in FIG. 3 ; and/or xi) the following unit cell parameters at 298 K: System a b c alpha beta gamma A Triclinic P 9.7(2) Å 12.7(3) Å 24.6(3) Å 78.92 86.15 102.2 2888 Å 3 ; wherein Form 4 is characterized by one or more of the following properties: xvii) an XRPD pattern with at least the following XRPD peaks (CuK 2θ) at approximately (±0.1): 16.3, 18.7, 22.8, 23.1, 25.7; and/or xviii) an XRPD pattern the same as shown in FIG. 4 ; wherein Form 5 is characterized by one or more of the following properties: xxiii) an XRPD pattern with at least the following XRPD peaks (CuK 2θ) at approximately (±0.1): 21.5, 24.5, and 27.3; xxiv) an XRPD pattern the same as shown in FIG. 5 ; and/or xxv) the following unit cell parameters at 298 K: System a b c alpha beta gamma Monoclinic P 32.06(5) Å 11.28(1) Å 8.43(1) Å 90 93.65 (2) 90; wherein Form 8 which is characterised by one or more of the following properties: xxxi) an XRPD pattern with at least the following XRPD peaks (CuK 2θ) at approximately (±0.1): 10.4, 10.7, 11.1, 24.2, and 24.5; xxxii) an XRPD pattern the same as shown in FIG. 8 ; and/or xxxiii) the following unit cell parameters at 298 K: System a b c alpha beta gamma Monoclinic P 10.67 Å 14.15 Å 16.19 Å 90 97.31 90;
  3. 3 . A method for treating a disease or condition associated with Aurora kinase activity and/or FLT3, comprising administering to a human or animal subject a therapeutically acceptable amount of crystalline Form 1 of Compound A fumarate of claim 1 , or crystalline Form 2, Form 3, Form 4, Form 5 or Form 8 of Compound A fumarate of claim 2 .
  4. 4 . A method of treating a proliferative disorder in a human or animal subject, comprising administering to said subject a therapeutically acceptable amount of crystalline Form 1 of Compound A fumarate of claim 1 , or a pharmaceutically acceptable amount of crystalline Form 2, Form 3, Form 4, Form 5 or Form 8 of Compound A fumarate of claim 2 .
  5. 5 . The method of claim 4 wherein the proliferative disorder is cancer.
  6. 6 . The method of claim 4 wherein the proliferative disorder is acute myeloid leukemia (AML).

Description

FIELD OF INVENTION The present invention relates to salts and polymorphic forms of a pharmaceutically active compound. More specifically, the present invention relates to salts and physical forms of a compounds that is an inhibitor of Aurora kinase enzyme activity. The compound of the invention is also an inhibitor of FMS-like tyrosine kinase 3 (FLT3) activity. The present invention also relates to processes for the preparation of the salts and crystalline forms of the compound, to pharmaceutical compositions comprising them, and to their use in the treatment of proliferative disorders, such as cancer, as well as other diseases or conditions in which Aurora kinase and/or FLT3 activity is implicated. BACKGROUND Proliferative diseases, such as cancer, are characterised by uncontrolled and unregulated cellular proliferation. Precisely what causes a cell to proliferate in an uncontrolled and unregulated manner has been the focus of intense research over recent decades. Aurora kinases, a family of three serine-threonine kinases designated as A, B, and C, play key and distinct roles in different stages of mitosis. At the early stages of mitosis, Aurora-A forms a complex with the targeting protein for Xklp2 (TPX2) that regulates centrosome maturation and mitotic spindle assembly. Aurora-B forms complexes with the inner centromere protein (INCENP), survivin and borealin thereby regulating chromosome condensation, chromosome alignment, mitotic checkpoint and cytokinesis. Over expression of Aurora-A and Aurora-B has been reported in a wide range of human malignancies including breast, colorectal, ovarian, glioma, thyroid carcinoma, and seminoma. The function of Aurora-C during mitosis is less well understood. However, high expression of Aurora-C has been reported in the testis. FLT3 is a trans-membrane kinase that belongs to the class III receptor tyrosine kinase (RTK) family. Binding of FLT3-ligand (FL) to its receptor leads to dimerisation, autophosphorylation and subsequent activation of downstream signalling pathways. High levels of FLT3 expression have been found in acute myeloid leukaemia (AML) blasts, and two major classes of mutations, i.e. internal-tandem duplications (ITDs) and tyrosine kinase domain (TKD) point mutations, have been identified in AML patients. Internal-tandem duplications are detected in 20-25% of AML patients, and tyrosine kinase domain point mutations in 5-10% of AML patients. There is, therefore, a further need for compounds that have a dual function of inhibiting both Aurora kinases and FLT3. Such compounds would be useful for the treatment of diseases and/or conditions in which Aurora and/or FLT3 are implicated, such as, for example, AML. Compound A described herein is one of such dual inhibitory compounds, having high activity against Aurora A, B, and C, and FLT3 kinases, as well an advantageous therapeutic window resulting from minimal interaction with cytochrome P450 activity and hERG. The preparation and biological testing of Compound A is described in WO 2013/190319. Other promising dual aurora/FLT3 kinase inhibitors are also described in WO 2013/190319. In order for an active pharmaceutical ingredient (API) to be prepared for clinical use, it must possess certain physical properties that enable a commercially viable manufacturing process. Accordingly, the physical and chemical stability of the API are important factors. For example, the API and formulations containing it must be capable of being effectively stored over reasonable periods of time without exhibiting changes in physico-chemical properties. Moreover, an API often needs to contacted with solvents during the manufacturing process, so it is desirable for the API to have stability in commonly used organic solvents. In addition, the compound ideally possesses a degree of inherent aqueous solubility so that it can be formulated in a manner that provides acceptable bioavailability, e.g. through gastrointestinal absorption. Obtaining a form of a therapeutically promising API that meets these complex and often contradicting requirements is a significant obstacle to pharmaceutical development. It is therefore an object of the invention to provide new forms of the API Compound A that has one or more of the advantageous properties mentioned above. SUMMARY OF INVENTION The invention relates to salts and polymorphic forms of Compound A. Compound A (6-chloro-7-(4-(4-chlorobenzyl)piperazin-1-yl)-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridine) has the structure: Compound A is a potent Aurora A, B, C and FLT3 kinase inhibitor with a large therapeutic index due to minimal interaction with the hERG channel and cytochrome P450 enzymes. The inventors have discovered multiple salts and polymorphic forms of Compound A. Salts of Compound A The invention provides salts of Compound A. For example, the invention provides Compound A fumarate, Compound A mesylate, Compound A hydrochloride, Compound A malate, Compound A sulfate, and Co